Antibodies to Saccharomyces cerevisiae are found in approximately 75% of patients with Crohn's disease, 15% of patients with ulcerative colitis, and 5% of the healthy population. High antibody titers increase the likelihood of disease, especially Crohn's disease, and are associated with more aggressive disease. As the inflammation in Crohn's disease is focused at the gut mucosa, most patients have IgA antibodies to S cerevisiae and half of these also have IgG antibodies.
So a positive IgA with a negative IgG often means that you have positive saccharomyces cerevisiae. If Saccharomyces cerevisiae antibody is positive and pANCA is negative, then it is likely that the person has Crohn’s disease. If Saccharomyces cerevisiae antibody is negative and pANCA is positive, then it is likely that the person has ulcerative colitis.